Load data
eqtl <- read.table('../../../../../output/strong_eqtl_names.txt', header = F)
df <- read.table('../../../output/network_ts/report/summary_table.txt', header = T)
df$eqtl_name <- eqtl$V1[df$idx]
df$rownum <- 1 : nrow(df)
eqtl_split <- str_match(as.character(df$eqtl_name), '([A-Za-z0-9]+).[0-9]+_([A-Za-z0-9_]+)')
wrong.ind <- sum(df$ensembl_gene_id != eqtl_split[, 2] | df$leading_eqtl != eqtl_split[, 3])
sum(wrong.ind)
## [1] 0
df <- df[!wrong.ind,]
motif_logo_prefix <- '../../../output/network_ts/report/motif_logo/'
mash_plot_prefix <- '../../../output/network_ts/report/mash_plot//mash__idx'
Motifs obtained from enrichment analysis
df.sub <- df[df$motif_from == 'from_enrichment', ]
if(nrow(df.sub) != 0) {
df.sub$motif_logo <- paste0('')
df.sub$mash_plot <- paste0('')
df.show <- df.sub
df.show <- df.show[, - which(colnames(df.show) %in% c('idx', 'eqtl_name', 'motif_from'))]
df.show <- df.show[order(df.show$r ^ 2, decreasing = T), ]
df.show$strand <- as.character(df.show$strand)
df.show$strand[df.show$strand == '-'] <- 'negative'
df.show$strand[df.show$strand == '+'] <- 'positive'
row.names(df.show) <- NULL
df.show %>% kable(format = "html", col.names = colnames(df.show)) %>%
kable_styling() %>%
kableExtra::scroll_box(width = "100%", height = "500px")
}
Motifs obtained from pre-defined list
df.sub <- df[df$motif_from == 'from_predefined_list', ]
if(nrow(df.sub != 0)) {
df.sub$motif_logo <- paste0('')
df.sub$mash_plot <- paste0('')
df.show <- df.sub
df.show <- df.show[, - which(colnames(df.show) %in% c('idx', 'eqtl_name', 'motif_from'))]
df.show <- df.show[order(df.show$r ^ 2, decreasing = T), ]
df.show$strand <- as.character(df.show$strand)
df.show$strand[df.show$strand == '-'] <- 'negative'
df.show$strand[df.show$strand == '+'] <- 'positive'
row.names(df.show) <- NULL
df.show %>% kable(format = "html", col.names = colnames(df.show)) %>%
kable_styling() %>%
kableExtra::scroll_box(width = "100%", height = "500px")
}
|
gene_name
|
ensembl_gene_id
|
leading_eqtl
|
motif_snp
|
r
|
motif_id
|
motif_name
|
motif_qval
|
motif_matched_sequence
|
motif_snp.pos
|
motif.length
|
strand
|
tissue
|
dbname
|
rownum
|
motif_logo
|
mash_plot
|
|
HEATR2
|
ENSG00000164818
|
7_776817_C_A_b37
|
7_807380_G_A_b37
|
0.9052799
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.00167
|
GCGAGGCGGAGCTGGCGCTGGG
|
17
|
22
|
positive
|
Muscle_Skeletal
|
human
|
75
|
|
|
|
HEATR2
|
ENSG00000164818
|
7_776817_C_A_b37
|
7_807380_G_A_b37
|
0.8776132
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.00167
|
GCGAGGCGGAGCTGGCGCTGGG
|
17
|
22
|
positive
|
Heart_Left_Ventricle
|
human
|
40
|
|
|
|
TRIM63
|
ENSG00000158022
|
1_26452386_G_A_b37
|
1_26394729_A_G_b37
|
0.8692527
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.00820
|
GTTGCGTGGGGCTGGGAGGGGG
|
7
|
22
|
negative
|
Muscle_Skeletal
|
human
|
69
|
|
|
|
TRIM63
|
ENSG00000158022
|
1_26452386_G_A_b37
|
1_26394729_A_G_b37
|
0.8692527
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01550
|
GTGGGGCTGGGAGGGGGTTGAG
|
2
|
22
|
negative
|
Muscle_Skeletal
|
human
|
70
|
|
|
|
TRIM63
|
ENSG00000158022
|
1_26452386_G_A_b37
|
1_26394729_A_G_b37
|
0.8692527
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.05290
|
GTGGGGCTGGGAGG
|
2
|
14
|
negative
|
Muscle_Skeletal
|
human
|
71
|
|
|
|
HEATR2
|
ENSG00000164818
|
7_776817_C_A_b37
|
7_807380_G_A_b37
|
0.8472339
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.00167
|
GCGAGGCGGAGCTGGCGCTGGG
|
17
|
22
|
positive
|
Heart_Atrial_Appendage
|
human
|
6
|
|
|
|
TRIM63
|
ENSG00000158022
|
1_26452386_G_A_b37
|
1_26394729_A_G_b37
|
0.8433112
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.00820
|
GTTGCGTGGGGCTGGGAGGGGG
|
7
|
22
|
negative
|
Heart_Left_Ventricle
|
human
|
35
|
|
|
|
TRIM63
|
ENSG00000158022
|
1_26452386_G_A_b37
|
1_26394729_A_G_b37
|
0.8433112
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01550
|
GTGGGGCTGGGAGGGGGTTGAG
|
2
|
22
|
negative
|
Heart_Left_Ventricle
|
human
|
36
|
|
|
|
TRIM63
|
ENSG00000158022
|
1_26452386_G_A_b37
|
1_26394729_A_G_b37
|
0.8433112
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.05290
|
GTGGGGCTGGGAGG
|
2
|
14
|
negative
|
Heart_Left_Ventricle
|
human
|
37
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258479_C_T_b37
|
0.8030259
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.00820
|
AGGGGGAGCGGCGCGGAGACCG
|
5
|
22
|
negative
|
Heart_Left_Ventricle
|
human
|
59
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258479_C_T_b37
|
0.8030259
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01560
|
ACGAGGGGGAGCGGCGCGGAGA
|
8
|
22
|
negative
|
Heart_Left_Ventricle
|
human
|
60
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258479_C_T_b37
|
0.8030259
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.04610
|
AGGGGGAGCGGCGC
|
5
|
14
|
negative
|
Heart_Left_Ventricle
|
human
|
61
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258479_C_T_b37
|
0.8030259
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.04620
|
GGGGAGCGGCGCGG
|
3
|
14
|
negative
|
Heart_Left_Ventricle
|
human
|
62
|
|
|
|
TRIM63
|
ENSG00000158022
|
1_26452386_G_A_b37
|
1_26394729_A_G_b37
|
0.8026087
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.00820
|
GTTGCGTGGGGCTGGGAGGGGG
|
7
|
22
|
negative
|
Heart_Atrial_Appendage
|
human
|
1
|
|
|
|
TRIM63
|
ENSG00000158022
|
1_26452386_G_A_b37
|
1_26394729_A_G_b37
|
0.8026087
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01550
|
GTGGGGCTGGGAGGGGGTTGAG
|
2
|
22
|
negative
|
Heart_Atrial_Appendage
|
human
|
2
|
|
|
|
TRIM63
|
ENSG00000158022
|
1_26452386_G_A_b37
|
1_26394729_A_G_b37
|
0.8026087
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.05290
|
GTGGGGCTGGGAGG
|
2
|
14
|
negative
|
Heart_Atrial_Appendage
|
human
|
3
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258479_C_T_b37
|
0.7287211
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.00820
|
AGGGGGAGCGGCGCGGAGACCG
|
5
|
22
|
negative
|
Heart_Atrial_Appendage
|
human
|
25
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258479_C_T_b37
|
0.7287211
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01560
|
ACGAGGGGGAGCGGCGCGGAGA
|
8
|
22
|
negative
|
Heart_Atrial_Appendage
|
human
|
26
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258479_C_T_b37
|
0.7287211
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.04610
|
AGGGGGAGCGGCGC
|
5
|
14
|
negative
|
Heart_Atrial_Appendage
|
human
|
27
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258479_C_T_b37
|
0.7287211
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.04620
|
GGGGAGCGGCGCGG
|
3
|
14
|
negative
|
Heart_Atrial_Appendage
|
human
|
28
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258082_AGCG_A_b37
|
0.7245239
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.02820
|
CAGCGGCGGGGGGG
|
2
|
14
|
positive
|
Heart_Left_Ventricle
|
human
|
51
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258082_AGCG_A_b37
|
0.7245239
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01390
|
CAGCGGCGGGGGGGCGCTGCGA
|
2
|
22
|
positive
|
Heart_Left_Ventricle
|
human
|
52
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258082_AGCG_A_b37
|
0.7245239
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01650
|
CGGCGGGGGGGCGCTGCGAGGA
|
-1
|
22
|
positive
|
Heart_Left_Ventricle
|
human
|
53
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258082_AGCG_A_b37
|
0.7245239
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.02050
|
GTGGCGAGCAGCGGCGGGGGGG
|
10
|
22
|
positive
|
Heart_Left_Ventricle
|
human
|
54
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258479_C_T_b37
|
0.7178413
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.00820
|
AGGGGGAGCGGCGCGGAGACCG
|
5
|
22
|
negative
|
Muscle_Skeletal
|
human
|
99
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258479_C_T_b37
|
0.7178413
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01560
|
ACGAGGGGGAGCGGCGCGGAGA
|
8
|
22
|
negative
|
Muscle_Skeletal
|
human
|
100
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258479_C_T_b37
|
0.7178413
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.04610
|
AGGGGGAGCGGCGC
|
5
|
14
|
negative
|
Muscle_Skeletal
|
human
|
101
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258479_C_T_b37
|
0.7178413
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.04620
|
GGGGAGCGGCGCGG
|
3
|
14
|
negative
|
Muscle_Skeletal
|
human
|
102
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258082_AGCG_A_b37
|
0.6934658
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.02820
|
CAGCGGCGGGGGGG
|
2
|
14
|
positive
|
Heart_Atrial_Appendage
|
human
|
17
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258082_AGCG_A_b37
|
0.6934658
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01390
|
CAGCGGCGGGGGGGCGCTGCGA
|
2
|
22
|
positive
|
Heart_Atrial_Appendage
|
human
|
18
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258082_AGCG_A_b37
|
0.6934658
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01650
|
CGGCGGGGGGGCGCTGCGAGGA
|
-1
|
22
|
positive
|
Heart_Atrial_Appendage
|
human
|
19
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258082_AGCG_A_b37
|
0.6934658
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.02050
|
GTGGCGAGCAGCGGCGGGGGGG
|
10
|
22
|
positive
|
Heart_Atrial_Appendage
|
human
|
20
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258082_AGCG_A_b37
|
0.6640893
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.02820
|
CAGCGGCGGGGGGG
|
2
|
14
|
positive
|
Muscle_Skeletal
|
human
|
86
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258082_AGCG_A_b37
|
0.6640893
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01390
|
CAGCGGCGGGGGGGCGCTGCGA
|
2
|
22
|
positive
|
Muscle_Skeletal
|
human
|
87
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258082_AGCG_A_b37
|
0.6640893
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01650
|
CGGCGGGGGGGCGCTGCGAGGA
|
-1
|
22
|
positive
|
Muscle_Skeletal
|
human
|
88
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258082_AGCG_A_b37
|
0.6640893
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.02050
|
GTGGCGAGCAGCGGCGGGGGGG
|
10
|
22
|
positive
|
Muscle_Skeletal
|
human
|
89
|
|
|
|
ADI1
|
ENSG00000182551
|
2_3502625_T_C_b37
|
2_3504819_A_G_b37
|
0.6574533
|
MA0807.1
|
TBX5
|
0.64000
|
GGGTGTGA
|
6
|
8
|
negative
|
Muscle_Skeletal
|
jaspar
|
103
|
|
|
|
ADI1
|
ENSG00000182551
|
2_3502625_T_C_b37
|
2_3504819_A_G_b37
|
0.6463913
|
MA0807.1
|
TBX5
|
0.64000
|
GGGTGTGA
|
6
|
8
|
negative
|
Heart_Atrial_Appendage
|
jaspar
|
29
|
|
|
|
ADI1
|
ENSG00000182551
|
2_3502625_T_C_b37
|
2_3504819_A_G_b37
|
0.6247632
|
MA0807.1
|
TBX5
|
0.64000
|
GGGTGTGA
|
6
|
8
|
negative
|
Heart_Left_Ventricle
|
jaspar
|
63
|
|
|
|
HEATR2
|
ENSG00000164818
|
7_776817_C_A_b37
|
7_808073_G_A_b37
|
0.5027494
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.02290
|
AGTGGGCGCTCCGGCTGGGAGG
|
4
|
22
|
positive
|
Heart_Atrial_Appendage
|
human
|
7
|
|
|
|
HEATR2
|
ENSG00000164818
|
7_776817_C_A_b37
|
7_808073_G_A_b37
|
0.4519233
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.02290
|
AGTGGGCGCTCCGGCTGGGAGG
|
4
|
22
|
positive
|
Muscle_Skeletal
|
human
|
76
|
|
|
|
HEATR2
|
ENSG00000164818
|
7_776817_C_A_b37
|
7_808073_G_A_b37
|
0.4302623
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.02290
|
AGTGGGCGCTCCGGCTGGGAGG
|
4
|
22
|
positive
|
Heart_Left_Ventricle
|
human
|
41
|
|
|
|
HEATR2
|
ENSG00000164818
|
7_776817_C_A_b37
|
7_807370_C_A_b37
|
0.3029477
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.00167
|
GCGAGGCGGAGCTGGCGCTGGG
|
7
|
22
|
positive
|
Heart_Atrial_Appendage
|
human
|
4
|
|
|
|
HEATR2
|
ENSG00000164818
|
7_776817_C_A_b37
|
7_807370_C_A_b37
|
0.3029477
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.02820
|
GCGAGGCGGAGCTG
|
7
|
14
|
positive
|
Heart_Atrial_Appendage
|
human
|
5
|
|
|
|
HEATR2
|
ENSG00000164818
|
7_776817_C_A_b37
|
7_807370_C_A_b37
|
0.3029477
|
MA0079.3
|
SP1
|
0.05870
|
GCTCCGCCTCG
|
6
|
11
|
negative
|
Heart_Atrial_Appendage
|
jaspar
|
31
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258084_CG_C_b37
|
0.2774015
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.02820
|
CAGCGGCGGGGGGG
|
4
|
14
|
positive
|
Heart_Atrial_Appendage
|
human
|
21
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258084_CG_C_b37
|
0.2774015
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01390
|
CAGCGGCGGGGGGGCGCTGCGA
|
4
|
22
|
positive
|
Heart_Atrial_Appendage
|
human
|
22
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258084_CG_C_b37
|
0.2774015
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01650
|
CGGCGGGGGGGCGCTGCGAGGA
|
1
|
22
|
positive
|
Heart_Atrial_Appendage
|
human
|
23
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258084_CG_C_b37
|
0.2774015
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.02050
|
GTGGCGAGCAGCGGCGGGGGGG
|
12
|
22
|
positive
|
Heart_Atrial_Appendage
|
human
|
24
|
|
|
|
HEATR2
|
ENSG00000164818
|
7_776817_C_A_b37
|
7_807370_C_A_b37
|
0.2752594
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.00167
|
GCGAGGCGGAGCTGGCGCTGGG
|
7
|
22
|
positive
|
Heart_Left_Ventricle
|
human
|
38
|
|
|
|
HEATR2
|
ENSG00000164818
|
7_776817_C_A_b37
|
7_807370_C_A_b37
|
0.2752594
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.02820
|
GCGAGGCGGAGCTG
|
7
|
14
|
positive
|
Heart_Left_Ventricle
|
human
|
39
|
|
|
|
HEATR2
|
ENSG00000164818
|
7_776817_C_A_b37
|
7_807370_C_A_b37
|
0.2752594
|
MA0079.3
|
SP1
|
0.05870
|
GCTCCGCCTCG
|
6
|
11
|
negative
|
Heart_Left_Ventricle
|
jaspar
|
65
|
|
|
|
HEATR2
|
ENSG00000164818
|
7_776817_C_A_b37
|
7_807370_C_A_b37
|
0.2204764
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.00167
|
GCGAGGCGGAGCTGGCGCTGGG
|
7
|
22
|
positive
|
Muscle_Skeletal
|
human
|
73
|
|
|
|
HEATR2
|
ENSG00000164818
|
7_776817_C_A_b37
|
7_807370_C_A_b37
|
0.2204764
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.02820
|
GCGAGGCGGAGCTG
|
7
|
14
|
positive
|
Muscle_Skeletal
|
human
|
74
|
|
|
|
HEATR2
|
ENSG00000164818
|
7_776817_C_A_b37
|
7_807370_C_A_b37
|
0.2204764
|
MA0079.3
|
SP1
|
0.05870
|
GCTCCGCCTCG
|
6
|
11
|
negative
|
Muscle_Skeletal
|
jaspar
|
105
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258085_GGC_G_b37
|
0.2111385
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.02820
|
CAGCGGCGGGGGGG
|
5
|
14
|
positive
|
Muscle_Skeletal
|
human
|
94
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258085_GGC_G_b37
|
0.2111385
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01390
|
CAGCGGCGGGGGGGCGCTGCGA
|
5
|
22
|
positive
|
Muscle_Skeletal
|
human
|
95
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258085_GGC_G_b37
|
0.2111385
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01650
|
CGGCGGGGGGGCGCTGCGAGGA
|
2
|
22
|
positive
|
Muscle_Skeletal
|
human
|
96
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258085_GGC_G_b37
|
0.2111385
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.02050
|
GTGGCGAGCAGCGGCGGGGGGG
|
13
|
22
|
positive
|
Muscle_Skeletal
|
human
|
97
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258085_GGC_G_b37
|
0.2111385
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.02150
|
GCGGGGGGGCGCTGCGAGGAAG
|
0
|
22
|
positive
|
Muscle_Skeletal
|
human
|
98
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258084_CG_C_b37
|
0.1905607
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.02820
|
CAGCGGCGGGGGGG
|
4
|
14
|
positive
|
Heart_Left_Ventricle
|
human
|
55
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258084_CG_C_b37
|
0.1905607
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01390
|
CAGCGGCGGGGGGGCGCTGCGA
|
4
|
22
|
positive
|
Heart_Left_Ventricle
|
human
|
56
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258084_CG_C_b37
|
0.1905607
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01650
|
CGGCGGGGGGGCGCTGCGAGGA
|
1
|
22
|
positive
|
Heart_Left_Ventricle
|
human
|
57
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258084_CG_C_b37
|
0.1905607
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.02050
|
GTGGCGAGCAGCGGCGGGGGGG
|
12
|
22
|
positive
|
Heart_Left_Ventricle
|
human
|
58
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258084_CG_C_b37
|
0.1873831
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.02820
|
CAGCGGCGGGGGGG
|
4
|
14
|
positive
|
Muscle_Skeletal
|
human
|
90
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258084_CG_C_b37
|
0.1873831
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01390
|
CAGCGGCGGGGGGGCGCTGCGA
|
4
|
22
|
positive
|
Muscle_Skeletal
|
human
|
91
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258084_CG_C_b37
|
0.1873831
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01650
|
CGGCGGGGGGGCGCTGCGAGGA
|
1
|
22
|
positive
|
Muscle_Skeletal
|
human
|
92
|
|
|
|
MRPS7
|
ENSG00000125445
|
17_73257986_C_T_b37
|
17_73258084_CG_C_b37
|
0.1873831
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.02050
|
GTGGCGAGCAGCGGCGGGGGGG
|
12
|
22
|
positive
|
Muscle_Skeletal
|
human
|
93
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267942_G_T_b37
|
-0.1575191
|
MA0079.3
|
SP1
|
0.05670
|
CTCCCACCCCT
|
9
|
11
|
negative
|
Heart_Atrial_Appendage
|
jaspar
|
32
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267942_G_T_b37
|
-0.1456621
|
MA0079.3
|
SP1
|
0.05670
|
CTCCCACCCCT
|
9
|
11
|
negative
|
Heart_Left_Ventricle
|
jaspar
|
66
|
|
|
|
ADI1
|
ENSG00000182551
|
2_3502625_T_C_b37
|
2_3524310_C_T_b37
|
-0.1435982
|
MA0807.1
|
TBX5
|
0.64000
|
AGGTGCGA
|
7
|
8
|
negative
|
Muscle_Skeletal
|
jaspar
|
104
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267681_AGCCTCCGC_A_b37
|
-0.1224085
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01390
|
GAGGCGCGGAGGCTCCCCGGGC
|
6
|
22
|
negative
|
Heart_Atrial_Appendage
|
human
|
10
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267681_AGCCTCCGC_A_b37
|
-0.1224085
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01390
|
GCCGGGCGGCGCAGAGGCGCGG
|
19
|
22
|
negative
|
Heart_Atrial_Appendage
|
human
|
11
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267681_AGCCTCCGC_A_b37
|
-0.1224085
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01600
|
GGGCGGCGCAGAGGCGCGGAGG
|
16
|
22
|
negative
|
Heart_Atrial_Appendage
|
human
|
12
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267681_AGCCTCCGC_A_b37
|
-0.1224085
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.02430
|
CAGAGGCGCGGAGGCTCCCCGG
|
8
|
22
|
negative
|
Heart_Atrial_Appendage
|
human
|
13
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267591_C_T_b37
|
-0.1149758
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01410
|
CCGGGGAGTGGCAGCCGGTGAA
|
1
|
22
|
positive
|
Heart_Left_Ventricle
|
human
|
42
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267591_C_T_b37
|
-0.1149758
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.04620
|
CCGGGGAGTGGCAG
|
1
|
14
|
positive
|
Heart_Left_Ventricle
|
human
|
43
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267681_AGCCTCCGC_A_b37
|
-0.1122818
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01390
|
GAGGCGCGGAGGCTCCCCGGGC
|
6
|
22
|
negative
|
Heart_Left_Ventricle
|
human
|
44
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267681_AGCCTCCGC_A_b37
|
-0.1122818
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01390
|
GCCGGGCGGCGCAGAGGCGCGG
|
19
|
22
|
negative
|
Heart_Left_Ventricle
|
human
|
45
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267681_AGCCTCCGC_A_b37
|
-0.1122818
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01600
|
GGGCGGCGCAGAGGCGCGGAGG
|
16
|
22
|
negative
|
Heart_Left_Ventricle
|
human
|
46
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267681_AGCCTCCGC_A_b37
|
-0.1122818
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.02430
|
CAGAGGCGCGGAGGCTCCCCGG
|
8
|
22
|
negative
|
Heart_Left_Ventricle
|
human
|
47
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267591_C_T_b37
|
-0.1053857
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01410
|
CCGGGGAGTGGCAGCCGGTGAA
|
1
|
22
|
positive
|
Heart_Atrial_Appendage
|
human
|
8
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267591_C_T_b37
|
-0.1053857
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.04620
|
CCGGGGAGTGGCAG
|
1
|
14
|
positive
|
Heart_Atrial_Appendage
|
human
|
9
|
|
|
|
GLRX5
|
ENSG00000182512
|
14_96011161_C_T_b37
|
14_96000890_G_A_b37
|
0.1045993
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01410
|
GCGGGGCTAGGCCGGGCGGGTA
|
2
|
22
|
negative
|
Heart_Atrial_Appendage
|
human
|
16
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267942_G_T_b37
|
-0.0983987
|
MA0079.3
|
SP1
|
0.05670
|
CTCCCACCCCT
|
9
|
11
|
negative
|
Muscle_Skeletal
|
jaspar
|
106
|
|
|
|
ADI1
|
ENSG00000182551
|
2_3502625_T_C_b37
|
2_3524310_C_T_b37
|
-0.0911524
|
MA0807.1
|
TBX5
|
0.64000
|
AGGTGCGA
|
7
|
8
|
negative
|
Heart_Atrial_Appendage
|
jaspar
|
30
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267591_C_T_b37
|
-0.0895492
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01410
|
CCGGGGAGTGGCAGCCGGTGAA
|
1
|
22
|
positive
|
Muscle_Skeletal
|
human
|
77
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267591_C_T_b37
|
-0.0895492
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.04620
|
CCGGGGAGTGGCAG
|
1
|
14
|
positive
|
Muscle_Skeletal
|
human
|
78
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267681_AGCCTCCGC_A_b37
|
-0.0744706
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01390
|
GAGGCGCGGAGGCTCCCCGGGC
|
6
|
22
|
negative
|
Muscle_Skeletal
|
human
|
79
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267681_AGCCTCCGC_A_b37
|
-0.0744706
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01390
|
GCCGGGCGGCGCAGAGGCGCGG
|
19
|
22
|
negative
|
Muscle_Skeletal
|
human
|
80
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267681_AGCCTCCGC_A_b37
|
-0.0744706
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01600
|
GGGCGGCGCAGAGGCGCGGAGG
|
16
|
22
|
negative
|
Muscle_Skeletal
|
human
|
81
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267681_AGCCTCCGC_A_b37
|
-0.0744706
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.02430
|
CAGAGGCGCGGAGGCTCCCCGG
|
8
|
22
|
negative
|
Muscle_Skeletal
|
human
|
82
|
|
|
|
GLRX5
|
ENSG00000182512
|
14_96011161_C_T_b37
|
14_96000890_G_A_b37
|
0.0506493
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01410
|
GCGGGGCTAGGCCGGGCGGGTA
|
2
|
22
|
negative
|
Muscle_Skeletal
|
human
|
85
|
|
|
|
GLRX5
|
ENSG00000182512
|
14_96011161_C_T_b37
|
14_96000890_G_A_b37
|
0.0281481
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01410
|
GCGGGGCTAGGCCGGGCGGGTA
|
2
|
22
|
negative
|
Heart_Left_Ventricle
|
human
|
50
|
|
|
|
ADI1
|
ENSG00000182551
|
2_3502625_T_C_b37
|
2_3524310_C_T_b37
|
-0.0234747
|
MA0807.1
|
TBX5
|
0.64000
|
AGGTGCGA
|
7
|
8
|
negative
|
Heart_Left_Ventricle
|
jaspar
|
64
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267949_A_G_b37
|
0.0183397
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.00935
|
GGTGGGAGGAGCCCCCGCGTCC
|
7
|
22
|
positive
|
Heart_Atrial_Appendage
|
human
|
14
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267949_A_G_b37
|
0.0183397
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.03850
|
GGTGGGAGGAGCCC
|
7
|
14
|
positive
|
Heart_Atrial_Appendage
|
human
|
15
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267949_A_G_b37
|
0.0183397
|
MA0079.3
|
SP1
|
0.05290
|
GCTCCTCCCAC
|
6
|
11
|
negative
|
Heart_Atrial_Appendage
|
jaspar
|
33
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267949_A_G_b37
|
0.0183397
|
MA0079.3
|
SP1
|
0.05670
|
CTCCCACCCCT
|
2
|
11
|
negative
|
Heart_Atrial_Appendage
|
jaspar
|
34
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267949_A_G_b37
|
0.0119356
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.00935
|
GGTGGGAGGAGCCCCCGCGTCC
|
7
|
22
|
positive
|
Heart_Left_Ventricle
|
human
|
48
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267949_A_G_b37
|
0.0119356
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.03850
|
GGTGGGAGGAGCCC
|
7
|
14
|
positive
|
Heart_Left_Ventricle
|
human
|
49
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267949_A_G_b37
|
0.0119356
|
MA0079.3
|
SP1
|
0.05290
|
GCTCCTCCCAC
|
6
|
11
|
negative
|
Heart_Left_Ventricle
|
jaspar
|
67
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267949_A_G_b37
|
0.0119356
|
MA0079.3
|
SP1
|
0.05670
|
CTCCCACCCCT
|
2
|
11
|
negative
|
Heart_Left_Ventricle
|
jaspar
|
68
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267949_A_G_b37
|
0.0089794
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.00935
|
GGTGGGAGGAGCCCCCGCGTCC
|
7
|
22
|
positive
|
Muscle_Skeletal
|
human
|
83
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267949_A_G_b37
|
0.0089794
|
SP1_HUMAN.H11MO.1.A
|
NA
|
0.03850
|
GGTGGGAGGAGCCC
|
7
|
14
|
positive
|
Muscle_Skeletal
|
human
|
84
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267949_A_G_b37
|
0.0089794
|
MA0079.3
|
SP1
|
0.05290
|
GCTCCTCCCAC
|
6
|
11
|
negative
|
Muscle_Skeletal
|
jaspar
|
107
|
|
|
|
DFNB31
|
ENSG00000095397
|
9_117314379_G_A_b37
|
9_117267949_A_G_b37
|
0.0089794
|
MA0079.3
|
SP1
|
0.05670
|
CTCCCACCCCT
|
2
|
11
|
negative
|
Muscle_Skeletal
|
jaspar
|
108
|
|
|
|
HEATR2
|
ENSG00000164818
|
7_776817_C_A_b37
|
7_766429_G_A_b37
|
-0.0053172
|
SP1_HUMAN.H11MO.0.A
|
NA
|
0.01750
|
AGGCGGTGGAGCTGAGCCGCGC
|
5
|
22
|
positive
|
Muscle_Skeletal
|
human
|
72
|
|
|